Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKAKAERKFKKYFAQGLLALPYGQLIEKIVPVLQAPKDSLEIRQIIDRPFSVIMEVVTDEGRSFFVKVYKLRNP-EKQRAELEREFAVSRFWFDKFKDDPEHRVIEPIWLDVENLILITRKSEGENLLK---LTGRLHLFPAKRVQQRVHRSLSQAGQWLKKFQSFSIVEEVPYVKPPVELTFSFLQDYILIRLQRMVQNPKLDFDEHFQQKIIDYLKSLWQ-KAGAQSERLTFAHTDFSLSNILAAEDKVTVLDFNKCEINSPYKDLSRFYHQLYLLSFK-----------------PTFQKSVIEEMKA----------SFLQGYGAPLAKDHPMFQIFFIIHQVTHLGKISRF-----------WERGLLENVYNHYLVSRVLKDLKQTVLV------
2OLC Chain:A ((5-396))--KTPLYETLN---------------ESSAVALAVKLGLTLTCQEIGDGNLNYVFHIY---DRALIIKQAVPYWPLTIDRARIESSALIRQG------EHVPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEHETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDGYLTDTLSHIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK


General information:
TITO was launched using:
RESULT:

Template: 2OLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1645 -34812 -21.16 -106.46
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -21.16
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.278

(partial model without unconserved sides chains):
PDB file : Tito_2OLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2olc-query.scw
PDB file : Tito_Scwrl_2OLC.pdb: