Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSKELEIVKKLTNVADENNIVLNEDGWTSRVYIVNKGEIV-LKFLKNKQYREEFEHEINILKLIKDH-KFNVNIPLISSSEEDNTYIVLN--GLMGKSMSAEIVDALTKEEKRKIGTQIGLFLKKLHTVAYQGKSP---NNESEIFEWFQKSFNRRKRTLKKHFNENELVAIE-DLVTTLPQRSQKLGIVQ---VFCHGDLGYNNILLT-DSLEVGVIDFGDAGYNDQSYDFVGLEDD-------DMLDAVILAYDGDEILKAK--VEIRRQLLPLMEMLFLIDKKDKEGVQQCVKRVRINLKMHEIYNG
6C5U Chain:A ((37-298))---------------------------GYDSVAYLVNNEYIFKTKFS--------YAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEY---------ILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEI------------


General information:
TITO was launched using:
RESULT:

Template: 6C5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1028 -3111 -3.03 -13.24
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -3.03
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_6C5U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6c5u-query.scw
PDB file : Tito_Scwrl_6C5U.pdb: