Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIESILKNIIKIEPITTGKSNDKKYLLVLKNGTLLFERVGPISR-YDRFKMMYDELIDLKSLNE-PGVPIPYFV-TKE---D-DTAVLLTSYSKGIPLNEVI-TDKNCSLDRVKELGRKAGNLLASVHTLSPLVP-TD--SGDYDVLFKNILSDYV---NLSLYLKHEQDMISFVLNHMK-EVMTARPITYIHGNFDERILWVSP--TDRIFFVDTCDISSFDPFYDFKNIGVITRFENIEFAKSIIDSYTQGHPTDEFWLAFELYNAFKLMSTTIELIKEGKEKEAIDKFETVADDFHGFKEDEIGKPKWY
3N4U Chain:A ((21-284))--------TINTIEISGEG-NDCIAYEI----NRDFIFKFPKHSRGSTNLFNEVNILKRIH---NKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNL--PKQSQNQAAKDLARFLSELHSINI-SGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP-TVLEKYRMKEKYWSFEKIIYGKEYGY-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3N4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1070 18097 16.91 73.27
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 16.91
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_3N4U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3n4u-query.scw
PDB file : Tito_Scwrl_3N4U.pdb: