Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRLCVSDSEALVL-LQSLPHVPQPVHIRRSSQGGE--HLVWTVNDALV-LRIPADQSNAEPLLRERRL-LDLLRRNDKIAPV-VPPCIDVGVWNPHGWQYALYH-KATGVSVESDPQAVT-NATEDDLVELL-VGLRGV-GVGDALGVGVPEGDEVDFEKLRGNARAALDVLQKSQQLMELGEVVS-LEK-LDAPWFVRLGGSMRRVLSHADLKGEHV-FLDAAGRVTGVIDWSDAQVGCP----------------------SVEVAGLAVAVGARMAARVAKRAGYEADIVCKGVIMAR-CNGVVCLEAI-LRGADDSPECLVRRQLGRAFEE-LD-A---------
3DXP Chain:A ((20-359))----RFDTEALEAWMRQHVEGFAGPLSVEQFKGQSNPTFKLVTPGQTYVMRA------KPGAIEREYRVMDALAGTDVPV-AKMYALCEDESVIGR-----AFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLG-----DYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPITGDWNFYLAFSMFRIAGILQGIMKRVVDGTASSAQALDAGKRARPMAEMGWEYAKKAKQ


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1249 -1135 -0.91 -4.04
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -0.91
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: