Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKAKAERKFKKYFAQGLLALPYGQLIEKIVPVLQAPKDSLEIRQIIDRPFSVIMEVVTDEGRSFFVKVYKLRNPEKQRAELEREFAVSRFWFDKFKDDPEHRVIEPIWLDVENLILITRKSEGENLLKLTGRLHLFPAKRVQQRVHRSLSQAGQWLKKFQSFSIVEEVPYVKPPVELTFSFLQDYILIRLQRMVQNPKLDFDEHFQQKIIDYLKSLWQKAGAQSERLTFAHTDFSLSNILAAEDKVTVLDFNKCEINSPYKDLSRFYHQLYLLSF---KPTFQKSVIEEMKA------SFLQGYGAPLAKDH----PMFQIFFIIHQVTHLGKISRFWERGLLENVYNHY-----LVSRVLKDLKQTV----LV-----------------------
4ONQ Chain:A ((7-353))-------RLPKPMIGFGVPTEPLPAMVRRTLP-----------SQAVGPPFFYYENVAL--------------APKGVWDTISSSL----------------YDIEPEFVDSKYFCAAARKRGYIHNLPVENRFPLFPLAP--RTIHEALPLSKKW---WPSWDPRTKLNCLQTAI--GSAQLTNRIRKAVEDFDGEPPMRVQKFVLDQCRKW-NLVWVGRNKVAP--------------LEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN-SFQVDTVAYHLSVLKDLFPGGINVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQRGNLIHFNDVQQLNGDRLEQLIESFGGFDLVIGGSPSLFSSYVRILDLVKSIMS


General information:
TITO was launched using:
RESULT:

Template: 4ONQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1363 -81585 -59.86 -289.31
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -59.86
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.202

(partial model without unconserved sides chains):
PDB file : Tito_4ONQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4onq-query.scw
PDB file : Tito_Scwrl_4ONQ.pdb: