Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKNIPNFNSFVKVEPIHKGWSGDKKYYVEAENGERFLLRVSDISK-YKEKESEFEIMKKMSA-TGMKMSLPISFGVCENEKSVYQLLTWCDGVEAKEALY-NLSDEEQYIFGQKAAKILRQIETIDYKPASEE---WVISYQERVKYYIELYRK---CGYTFDGDEMVISYLQTGLQ--HIGERPTALMHNDFQTDNMVISP----DGELYIIDFQMCGIADPYHVLTGVGVSAMYSIPFAKGQIEEYFGRNVPEDFWEKYNHYMLAEMLYSFTVGVNMEEE-R-ENTLHMFDDEVERIKNNGSHIPKWYQKKI 3TDW Chain:A ((20-305)) --------SIQSVESLGEGFRNY-AILVN---G-DWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR-SDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPV-ETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDC--GELF-TRQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLEGLRARDQDWISEGLELLEEDKANNFGANS----------

General information: TITO was launched using: RESULT: Template: 3TDW.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1194 6350 5.32 23.60 target 2D structure prediction score : 0.59 Monomeric hydrophicity matching model chain A : 0.69 3D Compatibility (PKB) : 5.32 2D Compatibility (Sec. Struct. Predict.) : 0.59 1D Compatibility (Hydrophobicity) : 0.69 QMean score : 0.465

(partial model without unconserved sides chains): PDB file : Tito_3TDW.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3tdw-query.scw PDB file : Tito_Scwrl_3TDW.pdb: