Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTARAEAGSALRRRFGTPDSRTSDELPNTTLDLLIGSSGGALLAEIVGERGGEVVGWSVRQVDHRPGVSVTVTYRCDVRWGDGLRRETLGASIGRPKHHDAPGVRTLDVDGQPAAVWMFPDDPGLPALRTALDPAAVGRLLGHHPVETTLRAYRPTRRAVVEATTPGGRVFLKVLRPAKAEALRRRHLLLTGAGVPVPDVLDHRGDGLLVLAPLAGTTLRDAVRTGGLVPSPRELLDVLDRLPAELCDQPRRAAWSENADYYATLVGAALPAEADRAATLADRVLDRIAG-LPDDGPTHGDFYEAQLLLTGGRLTGVLDVDSAGPGRRADD-LAC-LVAHLETLSLMPGWDGPRLRRLAREYAAAFAADLARRGTDPAELNARIAGVL-LSLATGPHRVQEPDWQAQTAARLSAADAWLTPARHGSRGLRYGDPMGRIVFMCGPAGAGKSTYARR-LEADGFVRLSIDAAAWAAGHREQPLAEPVRSRFEREVQERLVALAADGADVVVDLSFWSRRMRDTYRALLAPLGVVPETVYLATPRDVVLARVAART-GSHADDVVLDEAT-A-ALYSDHFEAPTADEGPLTVVTPSG-------------------- 1YJ5 Chain:A ((5-383)) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGWESLKKLLVFTASGVKPQGKVAAFDLDGTLITTRSGKVFPTSPSDW--RILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEEFFLKWPAARFELPAFDPRTISSAGPLYLPESSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTL-----------------GSWQRCVSSCQAALRQGKRVVIDNTNPDVPSRARYIQCAKDAGVPCRCFNFCATIEQARHNNRFREMTDPSH---APVSDMVMFSYRKQFEPPTLAEGFLEILEIPFRLQEHLDPALQRLYRQFSEG

General information: TITO was launched using: RESULT: Template: 1YJ5.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1624 -6776 -4.17 -19.30 target 2D structure prediction score : 0.51 Monomeric hydrophicity matching model chain A : 0.61 3D Compatibility (PKB) : -4.17 2D Compatibility (Sec. Struct. Predict.) : 0.51 1D Compatibility (Hydrophobicity) : 0.61 QMean score : 0.141

(partial model without unconserved sides chains): PDB file : Tito_1YJ5.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1yj5-query.scw PDB file : Tito_Scwrl_1YJ5.pdb: