Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MTARAEAGSALRRRFGTPDSRTSDELPNTTLDLLIGSSGGALLAEIVG----ERGGEVVGW--SVRQVDHRPGVSVTVTYRCDVRWGD-GLRRETLGASIGRPKHHDA---PGVRTLDVDGQPAAVWMFPDDPGLPALRTALDPAAVGRLLGHHPVETTLRAYRPTRRAVVEATTPGGRVFLKVLRPAKAEALRRRHLL----LTGAGVPVPDVLDHRGD----GLLVLAPLAGTTLRDAVRTGGLVPSPRELLDVLDRLPAELCDQPRRAAWSENADYYATLVGAALPAEADRAATLADRVLDRIAGLPDDGPTH---------------GDFYEAQL--LLTGGRLTGVLD------VDSAGPGRRADDLACLVAHLE-------TLSLMPGWDGPRLRRLAREYAAAFAADLARRGTDPAELN---ARIAGVLLSLATGPHRVQEPDWQAQTAARLSAADAWLTPARHGSRGLRYGDPMGRIVFMCGPAGAGKSTYARRLEADGFVRLSIDAAAWAAGHREQPLAEPVRSRFERE------------VQERLVALAADGADVVVDLSFWSRRMRDTYRALLAPLGVVPETVYL---ATPRDVVLARVAARTGSHADDVVLDEATAALYSDHFEAPTADEGPLTVVTPSG----------------
3ZVR Chain:A ((25-763))GMEDLIPLVNRLQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVDEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGLSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKNIHFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTSTIRKCSEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFIGFILVIRKGWLTINNIGIMSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVYPEPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCGDQNTLMEESAEQAQRRDEMLRMYHALKEALSIIG


General information:
TITO was launched using:
RESULT:

Template: 3ZVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2491 77995 31.31 133.10
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 31.31
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.165

(partial model without unconserved sides chains):
PDB file : Tito_3ZVR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3zvr-query.scw
PDB file : Tito_Scwrl_3ZVR.pdb: