Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------MSKIYEKYRDLITNPFDIKYKNIEIKEIISYPPAGNDVVECLCKIGKDARNVFIKI--ERSKVCDFATEIKNLNYLKNNSYYSKIPNIYESGIYNNKQYIVLSKIEGERLSDILIKNDNLRKELLYKYGQELAIIHRIPISNQKIAKQRAINSYPN----------KTMYTTLSKEN----------------NIKEYIKFLEDNDFKKEL----TTFIHGDFHYANVLWLNNDINGVI--DWEYSGIGLREQDIAWACTLRPG----QKFMDTMEDIQTFLKGY---SEKEKFDIEKLRWCLINSYCHFY------LMNENNEDYKNKLLILLRNCMEEKI----
2QG7 Chain:A ((50-458))YPITESNLRILEGEDRSEKAKELLKKYVSNVFENEKTLYIYCKYVMLHYGKDLVNPNEVDSLEFQIINGTNILIKVKDMSKQAKYLIRLYGPTDEIINREREKKISCILYNKNIAKKIYVFFTNG-------RIEEFMDGYALS----REDIKNPKFQKLIAKNLKLLHDIKLNENLYKELQVTQKVPGTRPSFLWNTIWKYFHLLNEERKKICSFDAKANILKLIDFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVGEGDSISFIDFEYSCPMERAYDIANHFNEYAGFNCDWDLTPSKEEEYHFIMHYLGTDDEELINQLIREIQPFYICSHINWGLWSLLQGMHSFDFINYGMTRLTASCLPIFRSKV


General information:
TITO was launched using:
RESULT:

Template: 2QG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1173 23568 20.09 82.98
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 20.09
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.325

(partial model without unconserved sides chains):
PDB file : Tito_2QG7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2qg7-query.scw
PDB file : Tito_Scwrl_2QG7.pdb: