Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIISRKYINEGFNSKAYIINDDYILLDGVNQNSYKNYQKYVNVINQISNVKSLEIPRIIELIEPCEEYPNGALIYKMIKGHTFRKEHIEIV---NLDNIAKKLAEFMDELYEIRVDFDKDEYIKNELEITEQSVIELKEYLSE----SNYEKILSWFNEYKNYLLTFNDYH-FIHGDLWYENYILN-DNNELVGIVDFEGSGMGDPAYDIAALY----YLGTGFINKVLSYYKYTDEDLIKRVSMLIKAREIADFDDMVKNYPEEVEEQVDKIKKVL
3SG9 Chain:A ((29-256))---------GEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKD-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 872 -9515 -10.91 -44.25
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -10.91
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_3SG9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3sg9-query.scw
PDB file : Tito_Scwrl_3SG9.pdb: