Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVFKNNIALGKSVTEALEILERELGSQYCYCKTL-EGCSNEVHIIKDVRSGLPYIMRFTR---------QSRFQNYSLEREILSHVVGRGVATSQAYLFADGIVAACIEGHCVESDKMLGDSPYYELIAKQMRRLHEISVQD-------DGTSVMYSETHYGLKSMLDISVDYIGKGREAELLYKLYSEDGVLGQLV--------------NDHPSLLWTCISHNDLHSGNIIYSPSAQEVRFIDWEYSTYSINAFDIACFFLEFTGIDC---------EISAFPCASKRQDFYLYYFGSSSPPIDFLCLFFIPLACLFWAAWSSGIDGLDVYTKNRTRLGHATLRKLVNEIWPQCGLTLDKEDCELLELVDFTFQSLYTN
3MES Chain:A ((66-350))----------------------KEINESYIEVKQIFSGLTNQLFVVSIVNE-----LKHPRILFRIYGKHV-KFYDSKVELDVFRYLSNINIAPNIIADFPEGRIEEFIDGEPLTTKQLQLTHICVE-VAKNMGSLHIINSKRADFPSRFDKEPILFKRI-YLWREEAKIQVSKNN--IDKELYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL--QTQNNIRMIDYEYSAINFAGADIANYFCEYIYDYCSEKQPYFKFKYEDYPCEELRKLFISVYLSQT--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3MES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 807 -20657 -25.60 -90.60
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -25.60
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.132

(partial model without unconserved sides chains):
PDB file : Tito_3MES.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3mes-query.scw
PDB file : Tito_Scwrl_3MES.pdb: