Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MFFSKELNLIDSLTTSDVEEYIRYFFPE---SRVISFKIIPEGYENILIKVKCENAFYILRISSMKKNHNMSSYSEKLIKRELDFI----KYLQKNGV--PVPTFYKSVADGKTYVKTESKSHVRFITLMNYIKGVH---PEYTKDNLQEIASKQVIFHNISIQFQTDYIENDEEYSAMSHRMI-SPSKLRTEQFPTRLYETMKEIYLDVRFELERYYKNTNKQMIHSDIKRDNIFFNQGKLVAFIDFGDIRYSVIAEDLGCFIWDLCDRVYDENGDFAHLVKKYLDDYQKYNQNFKKEDQRMAINYAIDRYSIINLHYLVENQGDNERLKYQVNKASKQLEIVKQLLDLRDTQFPYEKKASSC 2PPQ Chain:A ((5-212)) --------------TDITEDELRNFLTQYDVGSLTSYKGIAE------------NSNFLLH--TTKDPLILTLYEK---KNDLPFFLGLMQHLAAKGLSCPLPLPRK---DGELLGELSG----RPAALISFLEGMWLRKPE--AKHCREVGKALAAMHLASEGFE---IKRPNALSVDGWKVLWDKSEERADEVEKGLRE---EIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDF--------------------------------------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 2PPQ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 587 20869 35.55 110.42 target 2D structure prediction score : 0.43 Monomeric hydrophicity matching model chain A : 0.64 3D Compatibility (PKB) : 35.55 2D Compatibility (Sec. Struct. Predict.) : 0.43 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.187

(partial model without unconserved sides chains): PDB file : Tito_2PPQ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2ppq-query.scw PDB file : Tito_Scwrl_2PPQ.pdb: