Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADIANIDRNQDDPAEQISAVLQLA----GISQVGKIERILSGGMNQVYIVDDELVIRIN-DGRDGRTFERESKILK----TIKGRVKVPEIVFSDFSQTQMPFDIMVLKRIPGQPLVSE-WSTLNDSQRRVYIMRICDELRKLHGLPLGDIRELGEETPWATRVEQYI--EECLESASQDEQIDHQIVLFLKEYFSVNKRELQNPCQQVLTHNDIHFGNILV-SNGELQALLDFEYSGICPIDFELAKIINFCFTPGQYVEKKLERHYDKPMPDVLKWFMEFYPELFQQRSLAVRQRLFLIPEILWGFKVAYIPKVSSDRDRSDAISPEELIQKLQMAYDRFHYVFGEQFPHIKNEASP
6C5U Chain:A ((7-225))------------DNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYLVNNEYIFKTKFS------YAKEKAIYNFLNTNLETNVKIPNIEYSYISD---ELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNV-LEEYILLRETIYNDLTDIEKDY-IESFMERLNATTVFE----GKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGI------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 6C5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 590 34882 59.12 174.41
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 59.12
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.308

(partial model without unconserved sides chains):
PDB file : Tito_6C5U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6c5u-query.scw
PDB file : Tito_Scwrl_6C5U.pdb: