Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNIPNFNSFVKVEPIHKGWSGDKKYYVEAENGERFLLRVSDISK-YKEKESEFEIMKKMSATGM--KMSLPISFGVCENEKSVYQLLTWCDGVEAKEALYNL--------SDEEQYIFGQKAAKILRQIETIDYKPASEE--WV----ISYQERVKYYIELYRKC-GYTFDGDEMVISYLQTGLQHIGERPTALMHNDFQTDNMVISP-DGELYIIDFQMCGIADPYHVLTGVGVSAMYSIPFAKGQIEEYFGRNV--PEDFWEKYNHYMLAEMLYSFTVGVNMEEERENTLHMFDDEVERIKNNGSHIPKWYQKKI
5UXA Chain:A ((20-286))--------KEETIQFNESGLDFQ-AVFAQDNNGIDWVLRLPRREDVMPRTKVEKQALDLVNKYAISFQAPNWIIY------TEELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPS-NKAAALDLVVHTPEEARMSMKQRMDAVRAKFGVGENLWNRWQAWLNDD--DMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYR--AFGEEGLEALILAYKEIGGYYWPKMKEHIIELNAAYPVSIAEFALVSGI-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1021 -23851 -23.36 -96.96
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -23.36
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.269

(partial model without unconserved sides chains):
PDB file : Tito_5UXA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxa-query.scw
PDB file : Tito_Scwrl_5UXA.pdb: