Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRLCVSDSEALVLLQSLPHVPQPVHIRRSSQGGEHLVWTVNDALVLRIPADQSNAEPLLRERRLLDLLRRNDKIAPVVPPCIDVGVWNPHGWQYALYHKATGVSVESDPQAVTNATEDDLVELLVGLRGVGVGDALGVGVPEGDEVDF--EKLRGNARAALDVLQKSQQLMELGEVVSLEKLDAPWFVRLGGSMRRVLSHADLKGEHVFLDAAGRVTGVI-DWSDAQVGCPSVEVAGLAVAVGARMAARVAKRAGYEADIVCKGVIMARCNGVVCLEAILRGADDS-----------PECLVRRQLGRAFEELDA
4CRU Chain:B ((4-273))----MLEREKIYQWINELSS-------------------------------------PETRENALLELSKKRESV-----PDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQE


General information:
TITO was launched using:
RESULT:

Template: 4CRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1130 -56200 -49.73 -219.53
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -49.73
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.285

(partial model without unconserved sides chains):
PDB file : Tito_4CRU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4cru-query.scw
PDB file : Tito_Scwrl_4CRU.pdb: