Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------MSKIYEKYRDLITNPFDIKYKNIEIKEIISYPPAGNDVVECLCKIGKDARNVFIKIERS--KVCDFATEIKNLNYLKNNSYYSKIPNIYESGIYNNKQYIVLSKIEG----------ERLSDILIKNDNLRKELLYKYGQELAIIHRIPISNQKIAKQR---AINSYPNKTMYTTLSKENNI----KEYIKFLEDNDFK---KELTTF-IHGDFHYANVL-----WL---------------------NNDINGVI-DWEYSGIGLREQDIAWACTLRPGQKFMDTMEDIQTFLKGYSEKEKFDIEKLRWCLINSYCHFYLMNENNEDY-KNKLLILLRNCMEEKI-
4O7O Chain:A ((6-454))TLATKLPWSDWLSRQRWYAGRNRELATVKPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFDRRAILKVFRRVSSGINPDIELNRVLTRAGNPHVARLLGAYQFGDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTAQATFPVDRMLARLSSTVAVVPELREYAPTIEQQFQKLAAEAITVQRVHGDLHLGQVLRTPESWLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNR--AAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTA


General information:
TITO was launched using:
RESULT:

Template: 4O7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1052 22531 21.42 76.90
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 21.42
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.238

(partial model without unconserved sides chains):
PDB file : Tito_4O7O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4o7o-query.scw
PDB file : Tito_Scwrl_4O7O.pdb: