Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLPEFADPLLHAELADA-GIHGLKPVAPLCMGTSNQNFLATSQGESWVLRVNSRHTTELCPREREVACW-RLAAAAGLAPE--LRFVSGDYRYYL--SRYVHTEPPWH-KRYPNDLKTVRMLHELLTS-LQFLPKTARVITPATQWQHYRDLLAQYAPTFDAHQREAFNALLAQEDKIEEAIAGLQDSQQLSFCHRDLNPHNLLVHQDRLVCI-DFEYSCVSDRRVDLATLLACHTLTND----QARRLLQLQSY----GVSARELAWARQVYWAYAASWSLIMWHKGV----------GSPNWIRDALYQLHA---------- 2PPQ Chain:A ((5-320)) ------TDITEDELRNFLTQYDVGSLTSYKGIAENSNFLLHTTKDPLILTLYEKK-----NDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAH---WPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLLSRGSALRFFLTRLYDWLTTPAGALVVKKDPLEYLRKLRFHRTIANVAEYGLA

General information: TITO was launched using: RESULT: Template: 2PPQ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1287 -28327 -22.01 -103.76 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain A : 0.60 3D Compatibility (PKB) : -22.01 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.60 QMean score : 0.398

(partial model without unconserved sides chains): PDB file : Tito_2PPQ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2ppq-query.scw PDB file : Tito_Scwrl_2PPQ.pdb: