Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI-TADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWLYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKYT
4C9G Chain:A ((24-309))--------LIDFLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEE--GYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADS------RQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSL------------LASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQA---VKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGV-ISMYDQLQ---


General information:
TITO was launched using:
RESULT:

Template: 4C9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1069 -43717 -40.89 -166.22
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -40.89
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.187

(partial model without unconserved sides chains):
PDB file : Tito_4C9G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4c9g-query.scw
PDB file : Tito_Scwrl_4C9G.pdb: