Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSHIQRETSCSRPRLNSNLDADLYGYRWARDNVGQSGATIYRLYGKPNAPELFLKHG----KGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAW--LLTTAIPGKTAFQVLEEYPD--SGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF------SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFSPSLQ--KRLFQKYGIDNPDMNKLQFHLMLDEFF
1J7U Chain:A ((2-264))----------AKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENEN--LYLKMTDSRYKGTTY-DVEREKDMMLWLEGKLPVPKVLHFERH--DGWSNLLMSEADGVLCS---EEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADV-----DCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLGI-KPDWEKIKYYILLDELF


General information:
TITO was launched using:
RESULT:

Template: 1J7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1094 12943 11.83 52.40
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 11.83
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_1J7U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1j7u-query.scw
PDB file : Tito_Scwrl_1J7U.pdb: