Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTETLTKELAVTKALELPFWKAPSNAEILGGGITNF---------NVKITDEGRTYVVRLGEDIVEHGVMRFNELSACRAAHAA-GVAPAVR-YFQKGALVQDYIPADPLVEEEIQQLKMLELIAALLGKVHRDATQLIRGPVLAFWVFHILRDY-TETLRL--LDSDHISKLDDLMQKAQKLEAAVGNVH---------LVLCHNDLLPANIL-------NENGRLWLVDWEYAGMNSPLFDLGGLATNAGLSEGLQKL------------------LLETYF--------------DTPVSDELWERYNAMKCASLLRESMWSMVSEQTSKIQFDYADYTRENLLRFERAFAELQLK
2CKQ Chain:A ((66-384))---------------------------VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG--------AMVLESVMFAILAERSLGPKLYGIFPQGRLEQ-FIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPK---WLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLE--LENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENS-KQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQA---RFDAYFHQ----


General information:
TITO was launched using:
RESULT:

Template: 2CKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 927 -11529 -12.44 -46.49
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -12.44
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.297

(partial model without unconserved sides chains):
PDB file : Tito_2CKQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ckq-query.scw
PDB file : Tito_Scwrl_2CKQ.pdb: