Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVYTQLTDDQFSAFCQRFGVSFACAIPITQGIKNSNWFIQTTDDVDGAHSYVFTLFEERPLE-DIEKMAVILNQLDGKLPVAAPLSLVDSAE-KCYVIRYDNKAITLVPCLAGSHPQ----QTTQAMCHEIGTALAMLHETLQALQPSEQYGVPLYPWSDVR-------DRERQFMPADEAKLMSDIWQSYTDLPLATLP--KGLCHLDMFADNTLWNLSLNNSQKGEESLTGLLDFTEVSVEHYVMDIAITINDFCTTWGDAEQGESVNFDRSKMAAFLQGYESKRSLGADEKRALPVMLAKAAVIFWLLRLNVIHYNRTEGRTGDNIMVKNPDLMKRLAAYHWSHVEKAKNTVFVLLDNLLASQKDIQIVGVFSNITQAEQARDKLSNSSEFAIKEYTVDQLS
5IGI Chain:A ((2-233))-TVVTTADTSQLYALAARHGLKLHGPLTVNELGLDYRIVIATVDD---GRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQP--GSSTPDWVVPQDSEVFAESFATALAALHAV--PISAAVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHR--WQRWLD-DDSSWPDFSVVVHGDLYVGHVL----IDNT----ERVSGMIDWSEARVDDPAIDMA-----------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 770 -43322 -56.26 -200.56
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -56.26
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.173

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: