Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRRHSAPLALLQRATSFYDEQRKSNRDKEYPMDSLKQLLQEQYQLQAQTISPQKGGWAALAYR--VETKKHTYFLKMYEKSRTSTPKWTALIDEYVPALIWLNEQNDLNGK-VPVPILTKNGQCKCENDKGIFLLYEHIEGETIGPQQLTNDQVEQLATIIAALHAIGEETAPIATAQLKEDFSLPFAVSLYKLLTEQLA-TLPDDIQTTIAPFSQPLLSLIESTEK----RANTLKQRPLRYALCHTDLHHWNLMTSQ-GELVLIDWEGLKLAPVEADMMFVVD--------ECYNNAFMDHYRKRHLDYVIDQECLAFYQGRRKLEDIWEFLEQLLFDEQKPTERAAILEGLEKELEAVAKACL
3I1A Chain:B ((5-319))-----------------------------PIQAQQLIELLKVHYGIDIHTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYHD---------EINLSIIRLLHDS-GI--KEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVP-ISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIGGGVGNVWNKPHEIQYFYEGYGEINV----DKTILSYYRHERIVEDIAVYGQDLLSRNQNNQSRLESFKYFKEMFDP------


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1303 -31905 -24.49 -107.06
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -24.49
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: