Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLDNSDKYLLPLLPKIILEKTNKKAEKIKFIGGGSFGRVYKAELSNGETI---AIKAYRIQGSQYEEANQLNLLSKN--TSVKTPKVIFTYEDENTAILAMTFVEGKNVLNPLFLFKSKKQKQLFANDVVDGMLQWHSVTGEKFGALSNPTYD---SWYEYYKTVNQELWLKDLAKLAKNGKFSKKRMQLLYDATEIFNKLPEETTAPVLIHSDLNIMNIMADPKTLKLTAFIDPCTSIWADREYDLFQLRNMWGDAYGLYETYKKKYKLSKYADFRVAYYGAMLEASMRLKGGLILPFWEDLTMMRLKKEIKMLNNL
5IQG Chain:A ((25-235))-----------------------NFKVDSIEIIGSGYDSVAY---LVNNEYIFKTKFSTNKKKGYAKEKA-IYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMH---GLDY-----CTIDNKQNVLEEYILLRETIY-NDLTDIEKD--YIESFMERL-NATTVF------EGKKCLCHNDFSCNHLLLDGNN-RLTGIIDFGDSGIIDEYCDFIYL--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 731 -14304 -19.57 -72.24
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -19.57
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.235

(partial model without unconserved sides chains):
PDB file : Tito_5IQG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqg-query.scw
PDB file : Tito_Scwrl_5IQG.pdb: