Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDELIMESLISRIKNNFPEINIKKFYAIESGWMNYIIV--INDAIVFRFPKTRKMVKKFQKEIRLLSILHNP-PVKVPEYVFISKDEPVY----GGYYKINGVPLNNS------KSLGKGILSDFIRFLNYLKSYNGYKFHSNDIDIYNYKTWKYYENSLIQMFSESLADHIKESYFNNIVNLMESAFSDLEPDDF------SLIHGDLSNGNVIINRRHDRINGIIDWSDSCYGDMALDIAAIVDN---YPIAALDPLLLNYEQKFSHRAIKRVLFYRAVSPLYYAHYMARTGNNDLKNYCDQIINGRKYKIRMGAAEKMLKNK
3SG8 Chain:A ((28-261))-----------------------------SGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKI-----NEDNKKIKKLLSRELKGPQMKKVDDF----YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK----HKDIPTVL-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 851 26770 31.46 126.27
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 31.46
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.334

(partial model without unconserved sides chains):
PDB file : Tito_3SG8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3sg8-query.scw
PDB file : Tito_Scwrl_3SG8.pdb: