Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVELTDPDLERLRRRLAPAHIEDLRPLTGGASSLTYAGQRLGDRVVVKMAPPGIQPTRNRDVLRQCRIIKALRATPVPVPDVLWADAGDPPEIPPLFVMSWIDGSSLEPLFDLDCACESEDIVAERFRSAAATMAQLHRIQPAA-IGLGSEPI------VGAEAEIDRWCRALE-TVDPTLAAGWIDLGKALRAAAPPPLPPAVVHGDFRLGNLRAVDGRITGVLDWEIWSVGDPRVDVGWFLINCDRQTYQRATPYAGATPSPAELVSIYCAAAGYRLPDLAWFQALACFKSAATWSLIVKHNRRRHRPDANVEAMAQVLPHLLSRACILLD
3W0P Chain:A ((9-229))------TSVEKFLIE-KFGSVSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCADGFYKDRYVYRH------FASAALPIPEVL--DIGEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEVMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA---LDELMLWAEDCPEVRHLVHAAFGSNNVLTDNGRITAVIDWSEAMFGDPLYEV----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 850 -52044 -61.23 -244.34
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -61.23
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.207

(partial model without unconserved sides chains):
PDB file : Tito_3W0P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0p-query.scw
PDB file : Tito_Scwrl_3W0P.pdb: