Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTASVEVPQYVAEETTARWPNVGPQWVSEAPGELRQLCEQYGAIPETVLPARYGLVVAVQAKDRELIMKGSPDP-----DGPNQVKVMSALADLQVGPTILESFSTDTGFWTIMTRIKPGE-PLRNLGASLAPPDKLATILRPLVNQPSPSSTL-P---YIGDWLRDRLEDDALSDLAPGRTVASETERSEALSVLSELTDAG-AQGLCHGDTSPGNILTGENGKLYLIDPR-GMRGEAAYDVAVLGLKSA-MTVSPETRVSDLAKAVGVDVGRAERWAAIALAARV
4R7B Chain:A ((46-252))-------------------------------------------------GGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKDLGL-DVKNYLF-DIEAG-IKVNEYIESAITLDSTS-IKTKFDKIAPILQTIHTSAKELRGEFAPFEEIKKYESLIEE------QIP--YANYESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEFTSQEEETFLSHYESDQ-------------------


General information:
TITO was launched using:
RESULT:

Template: 4R7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 740 31484 42.55 162.29
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 42.55
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.270

(partial model without unconserved sides chains):
PDB file : Tito_4R7B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r7b-query.scw
PDB file : Tito_Scwrl_4R7B.pdb: