Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------------------------------------MKNIPNFNSFVKVEPIHKGWSGDKKYYVEAENGERFLLRVSDISKYKEK-ESEFEIMKKMSATGMKMSLPISFG-VCENEKSVYQLLTWCDGVEAKEALYNLSDEEQYIFGQKAAKILRQIETIDYKPASEEWVISYQERVKYYIELYRKCGYTFDGDEMVISYLQTGLQHIGERPTALMHNDFQTDNMVISPDGELYIIDFQMCGIADPYHVLTG-VGVSAMYSIPFAKGQIEEYFGRNVPEDFWEKYNHYMLAEMLYSFTVGVNMEEERENTLHMFDDEVERIKNNGSHIPKWYQKKI---------------------------------------------------------------------------------------------------
2ACX Chain:A ((14-532))KARKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERNPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPDDKRKACGRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----------------------------------------------GFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE-----------RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGS


General information:
TITO was launched using:
RESULT:

Template: 2ACX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 789 -1020 -1.29 -4.30
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -1.29
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_2ACX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2acx-query.scw
PDB file : Tito_Scwrl_2ACX.pdb: