Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPDDDLARRIRAAVDAGELHGVTAEPGDPEIAPLGSGESYTAWRIGSGD---------QARVLRVPRRPPHEM-PRSMEAEFEVLRRVPPE-LGTSAVALETGADSPLGAPYMVTTHVPGRALRAADW-NPRLATSLAHQIARLHVAFAAGPAPSAASVPSASEQGEELLTWWGRYHPETLT-D----PRVSALL-PAWLRELTRLAPAFE-AVPTHPLIHGDVVATNVILGPD------GVPRLIDFEWSGPGDTAKDLALIGGRVTGGP-----------WYLPMTPDDVAALVTEYSRYSRHAG--------AIDPQQLLARRDVYELLDRLGNLLYCLSRPGEARYGRWADDLACNLTDRLAD
5FUT Chain:A ((30-349))--------------------------DEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG------GAEAMVLESVMFAILAERSLGPKLYGIFP------Q--GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPK--------WLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQA----------------------


General information:
TITO was launched using:
RESULT:

Template: 5FUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 888 -36283 -40.86 -143.41
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -40.86
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.295

(partial model without unconserved sides chains):
PDB file : Tito_5FUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5fut-query.scw
PDB file : Tito_Scwrl_5FUT.pdb: