Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLDKKIIKIFKDKLN-EKVIKITDSSNGLAQIVKIVETKNKKYVFK-N-PKPGDGIMIYRENFVCSNLKS---KFIPKVFFK-----TKNYLIESFLEGTRPERNK-----PE---IFYYSLGKNIRKIHKVKMTGFGELQKNGKGQYKTAKQYIDNLIIENFPKFKNIKSFDKKILKYLEKFIYENI--NCFDEKNSFLLHFDLIPDNILMQD----NKLAGIIDFGDANCGPVEYDFGKLYLEISDKMFTKVLEGYGKKL--EM--KKIQYFVVLHLLCILPYFYKVN-RKRYEKSVKLLRKFSKF 3TDW Chain:A ((6-294)) ---LHYTTMIMTQFPDISIQSVESLGEGFRNYAILV---NGDWVFRFPKSQQGADE-LNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGV----PVTNLKNKILLLSEAVEDQ--VFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDCGELFT-RQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLEGLRARDQDWISEGLELLE-----

General information: TITO was launched using: RESULT: Template: 3TDW.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1134 16559 14.60 63.93 target 2D structure prediction score : 0.58 Monomeric hydrophicity matching model chain A : 0.68 3D Compatibility (PKB) : 14.60 2D Compatibility (Sec. Struct. Predict.) : 0.58 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.373

(partial model without unconserved sides chains): PDB file : Tito_3TDW.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3tdw-query.scw PDB file : Tito_Scwrl_3TDW.pdb: