Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MDMKLSDSKTELARRHNKVVYQDGN------RVVKVFNDQKP--------ASDVFNEALNTARIMGTDIKVSEVLEVSRIEGGEWNGSWAIANSYIPGRTLRDIASEVSYPDKNNPDLDKLQEFTEKMVDLQISVQNVKAPLLNRQKDKLARMVNSVKAIDPSTRYDLELRVDGLHNIGAVCHGDFVPSNIIVADDGELYICDWAHVTSGDPVVDAAQTYLLLKLRHPIWAESYLELYTRKADVAKQKIHYWVPVVAAAELARGR----KRDEDFLMAQVNAGDFQ--------------------------------------------
1PHK Chain:? ((15-291))FYENYEPKE---ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS-GHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLS-----EKETRKIMRALLE-----------VICALHK------------------------------LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM--NDNHPGYGK-EVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV


General information:
TITO was launched using:
RESULT:

Template: 1PHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 969 16832 17.37 79.02
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 17.37
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.350

(partial model without unconserved sides chains):
PDB file : Tito_1PHK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1phk-query.scw
PDB file : Tito_Scwrl_1PHK.pdb: