Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHDALITAALHPYGLS--GAPFTVLRT-LGNVVARVDTPD-GPRGLRVCRSSVTRERLHEEFRVLAAARA-AGLDVPEPLPDVTGDPLPRAQGRDVALFRWVPG-EGAGAHM-----------SEAVAAQLGTLSAHLHAALRALGQPHPWYGPTHDAAWLSGPASWWATRADRD-LGAHACARMAPAIAACAQHLAHHAAEMQVIHADLHFGNALVRADGTVAAIDFDMCAVGLPAFDLAVTEGEFEDFDHPDALKAAFRGAYAAASGAPYPQGVALMRVAASVAFLEWVFTSANDEVRTQKLRWVPRLIDRVAARAPGARQGGPTGSAGPRP
5UXD Chain:A ((7-255))---LDALLDLAARHGLDLDGGTLRTEEIGLDFRVAFARAHDGGDWVLRLPRRPDVLERAAVEGRLLAMLAPHLDVAVPDWRIST----------SELIAYPLLPGSPGLTVAADGEVSWHVDMASTVYARSLGSVVAQLHAVDAEAAAATGIEVR--SPAQVR---GAWRQDLARVGAEFEIAPALRERWEAWLADDGCWPGHSVLTHGELYPAHTLVEDERITAVLDWTTAAVGDPAKDLMFHQVSA-----PSAIFEVALQAYAEGGGRP---------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 923 -24179 -26.20 -104.67
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -26.20
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.205

(partial model without unconserved sides chains):
PDB file : Tito_5UXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxd-query.scw
PDB file : Tito_Scwrl_5UXD.pdb: