Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MGRLCVSDSEALVLLQSLPHV-P-----QPVHIRRSSQGGEHLVWTVN------------DALVLRIPADQSNAEPLLRERRLLDLLRRNDKIAPVVPPCIDVGVWNPHGWQYALYHKATGVSVESDPQAVTNATEDDLVELLVGLRGVGVGDALGVGVPEGDEVDFEKLRGNARAALDV---LQKSQQ-LMELGEVVSLEKLDAPWFVRLG-GSMRRVLSHADLKGEHVFLDAAGRVTGVIDWSDAQVGCPSVEVAGLAVAVGA------------------RMAARVAKRAGYEA---------------DIVCKGVIMARCNGVVCLEAILRGADDSPECLVRRQLGRAFEELDA 1NW1 Chain:A ((55-396)) ---------RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSER---HLG-PKLYGIF------SGGRLEEYIPSRPLSCHE-ISLAHMSTKIAKRVAKVHQLEVPIWKE---PDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPK---RLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVE--------------------

General information: TITO was launched using: RESULT: Template: 1NW1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1057 -31632 -29.93 -123.56 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain A : 0.65 3D Compatibility (PKB) : -29.93 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.227

(partial model without unconserved sides chains): PDB file : Tito_1NW1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1nw1-query.scw PDB file : Tito_Scwrl_1NW1.pdb: