Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLEQDIRAILRTEIKKHLKFKDVQCELNEIRSKNGVYVYRIITTSTSYVIKYFEKNE--FRRELDYYNLLIELEIPTIPVISMTDQSIILED---IEQSETYRLGFESDLENENVARGLVAWYTQFHKKGRIYLKQNPEQK--ASLYNEYNELTK--NVITDIMTKTG-TNHYKYWHI-------LIN----HFDDLIA-------QSKSYTSTLTYNDFYYTNFIVSKDESEVIMFDYNFLGVGYRYSDVRNIVSSLKG-------NAKSLFLACYP---QCNEGEVILDDVLADLFVLKEAYKRDQFPSWAKIPVEQLDNGVFEQKVLKLKHYFKFD
2Q83 Chain:A ((23-298))-----------AENVLQGWDVQAEK--IDVIQ----ALVWKVHTDSGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPP-NGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENE-QIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQV-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 918 -7392 -8.05 -31.59
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -8.05
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: