Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRPPTPTADTVRRLVRTLLKDGAADASGPEVRPAAPGADPVTWLVGGRHVLRLARDRDAAARQRRELRLRDLVRTHVPVAVP---VSVAQGEWAPGLAYTLDTRV-PGASGAEHDV---SAVGEADLAGLLTGLREVPARQAETLGVPRAAPRSLEALRAAAEPAAERLAGADEFDAARLRQLTRAAAVQLAAQSAPP---VLVHHALTGGHLVVSADGRVRAVLGWAGTVLGDPAEDIAGLALAVGSPAAVRAATLAGYGARPCLRGLWLARCDAVLQLAARLDGTGTAPLPRLRTRLRHAWEAILLERVTELRAEAGEDGERRA
5IGT Chain:A ((46-240))----------------------------------------------GRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQA---RQKVADDVDRVRREFVVNDKRLHRWQR----WLDDDSSWPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVFG-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 682 -27982 -41.03 -151.25
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -41.03
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.305

(partial model without unconserved sides chains):
PDB file : Tito_5IGT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igt-query.scw
PDB file : Tito_Scwrl_5IGT.pdb: