Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRPVPADLLEITDALLPGAPLDSARLAEHGNMHHVVLLPGIAAVRVSKRAGAAAELPRRVGILHAVAAAGMPFAVPE------PMTAVTTFGERAAVAVSWIDGASLPEGT--GDPTVFG----PLLDALREVRISPELEAAL-----HRPRRRADDGSGWAD---ILNNQVIPRLPARWRDRVRQRSDELLAIEEVPASLVHGDLGGGNVHFGADGTLTGVLDWDMAILSDPAIDAALVATWHGWHMLRAATDEQIYRRAGAWDAAVGAGHLHAILRGRPLSNVDGFVRSVIAWLEDPGRCRDR
5IGT Chain:A ((51-233))--------------------------------------------LRIPRRAEVSAKVEPEARVL-AMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQ--PGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRW-QRWLDDDSSWPDF--------SVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMA-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 443 5012 11.31 30.75
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 11.31
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.209

(partial model without unconserved sides chains):
PDB file : Tito_5IGT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igt-query.scw
PDB file : Tito_Scwrl_5IGT.pdb: