Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLSHLVDVVRRAHPDVDLEGAGVHSGQFHDVL---IARDRVFRFPKTAGAAAELPGRVAVLTAVDAVELGVGVPVPLSEV-RDGGPH-----GFLVLSRLHGTPLERGDATS--PEVIDVVAAEFARVLRAMAGADVE--KLRLVLPV-----ADAGRWRGFAGR-VRATLFPLMSEDGRARAERELAAAVAMDHVATGLVHGDLGGENVLWQQVEELPRLTGIVDWDEAKVGDPAEDLAAV---GASYGPELVERVVALLGAGDL---WPRIRAYQGTFALQQALAGAEDGDDEELEDGLTAYR
4DT8 Chain:A ((5-296))-TFDQVEKAIEQLYPDFTINTIEI-SGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHN-----KLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYY-----PCLIHNDFSSDHILFDT--EKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYEEGLNEIR


General information:
TITO was launched using:
RESULT:

Template: 4DT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1167 11436 9.80 42.83
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 9.80
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.402

(partial model without unconserved sides chains):
PDB file : Tito_4DT8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dt8-query.scw
PDB file : Tito_Scwrl_4DT8.pdb: