Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLKSGEAEHETPHSKIPPDSHGIIPPDLQPKIPSFLSGTSRLDDSRQRPTADLPKRGFEEPIAQEVPESEAVSVPPSLAAWIRAQRGEIIADLSGELCECFVLRIRTEA---------SGDVVAKIPGKFRY---PVERELRARPYLEGLINERLAPREVFADSSQAVIVYDFVPGEAASKATAHLSAEKIPRIFRQAGYALARLHQAATRPSNGYEKAQVCRTLARIAEIEDSAFSTL-----RREHS---ELLSQAREELGAY---QPRDLPLVPSHGDYRADNWIVGEGGELRVIDFGRFGFRPALADFMPLARSEWP-----------------KNSLLRDVFLEGYASGGAG--HGTIGGIIAEGRGGWWRVSNICDVLGNLWFEVRGASARLQAEDSDKRTAERSSEATRQAHPHAQADLQLDAQAELQAGFTALARALGF
3C5I Chain:D ((36-332))----------------------------------------------------------------------------------------LRVKQIL--L-TNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKY--KI-APQLLNTFN--GGRIEEWLYGDPLRID-----DLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTN-KCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPT-PKLIDEILEAVEVQALGAHLLWGFWSIIRGYQ----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 912 -4896 -5.37 -19.51
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain D : 0.61

3D Compatibility (PKB) : -5.37
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.241

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: