Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVGETVDRIVADALEAEVRSRYRPR----SGSVAETVVCRLETGDGDGDEPPSRVVCKRGGASVWTGDVIEPLVLEYMTAATDLPVP---RVLASGSFADGSNDPLERWAIYEFREGANPGPRYH---KLEPTVRRRLVADAGELLGRLHGTSALAFDRVGGLARGADDRSLRLREPDGWHAVDPGWPLTRVPVPLAGDEDCRPVLTHGDYQPSNLLVDDDGAVTAVLDWGNA-----------HVT---HAEYALARAEARFVDVYAGRLP---RAERKQLQELFRRTYANCAPLETGFDRRAPVYKLLWVAQSGANYLRIAREPR----GRRQLRTQVRRLVE
1O6Y Chain:A ((23-298))-------------TPSHLSDRYELGEILGFGGMSEVHLARDLRLH-------RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE--AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN--------G--------------------------------------------IIHRDVKPANIMISATNA-VKVMDFGIARAIAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS-----ADLDAVVLKALA-----KNPENRYQTAAEMRADLVRVHN


General information:
TITO was launched using:
RESULT:

Template: 1O6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1117 1563 1.40 6.82
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 1.40
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.341

(partial model without unconserved sides chains):
PDB file : Tito_1O6Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1o6y-query.scw
PDB file : Tito_Scwrl_1O6Y.pdb: