Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRR-ESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAEL-----------------AAQKAREEEERAKREELERILEEN-------NRKIAEAQAKLAEEQLRIVE-EQRKIHE-----ERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKTQD 5MQ0 Chain:V ((514-1124)) ----------------------------------------------KRNTESVEDRGRSNDAHTSRNMKNKIKRRALTSPERWEIRQLIASGAASIDD---------YPELKDEIPINTSYLTAKRDDGSIVNGNTEKVDSKLEEQQRDETDEIDVEL--NTDDGPKFLKDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAIRDHREEKLRKKREIEQQIRKQQSFDDPTKNKKDSRNEIQMLKNQLIVTEWEKNRMNESISYGKRTSLPISAQRQ--------------------------

General information: TITO was launched using: RESULT: Template: 5MQ0.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain V - contact count / total energy / energy per contact / energy per residue : 705 120299 170.64 633.15 target 2D structure prediction score : 0.29 Monomeric hydrophicity matching model chain V : 0.73 3D Compatibility (PKB) : 170.64 2D Compatibility (Sec. Struct. Predict.) : 0.29 1D Compatibility (Hydrophobicity) : 0.73 QMean score : 0.000

(partial model without unconserved sides chains): PDB file : Tito_5MQ0.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5mq0-query.scw PDB file : Tito_Scwrl_5MQ0.pdb: