Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDTDSLKNARFYATKTEPITDVDIVAEAPLERPELIKGKDAPGILTFARVHREGGSDLYQLVVDKQGRDILGEEETARAAGKQLSNGYAVGSGVLHKLTDPALPPVETVRAVGEQSNTSWIYNDRVIVKYFRRLTPTPNPEIELLEELTAAGCTHSAPLRGWTSVDIEGHTYVTAMLQDLVPG-TDGYDYVTGT-----------------PDAFDATALGEAIRDVHTVLASTCETGTLAPGALATNLDRRLTGLVGRAPQLKEYEEKIRALYSTLAETSVPTQRIHGDLHLGQTLVDGDSWALIDFEGEPAASLEERRRPDSPLRDVAGMIRSFGYAAAASG----------------QDQSWADARTAELIAGYGEA-------DEAILRAYIADKCAYEVVYELENRPHMVHVPLDALASLV
5JY7 Chain:O ((198-439))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANSAEGWDMATTSTRDLFAEGDLYAEEVGGDFAGEAYRLGEAVASVHACLAHELGTE-EVPF-PADVMAQRLAAAVDAVPELREHVPQIEERYHKLADTTMTVQRVHGDLHLGQVLRTPKGWLLIDFEGEP---LDERRRPDTPVRDVAGILRSFEYAAHQRLVDQAGDDDDRARQLAARAREWVTRNCASFCDGYAAEAGTDPRDSADLLAAYELDKAVYEAAYEARHRPSWLPIPLGSIARL-


General information:
TITO was launched using:
RESULT:

Template: 5JY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 747 11719 15.69 59.19
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain O : 0.66

3D Compatibility (PKB) : 15.69
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_5JY7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5jy7-query.scw
PDB file : Tito_Scwrl_5JY7.pdb: