Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFGKEVNMKNIEKEILKRINELYPL--DFINITP----VTNEMYQCLAKQGNYFVRITNYKT---YEEQ-LEEVKYTDFLYKEGLGVPPIIPSLTGNLVEKITLNRELFTVLYKAAPGIHLPKSEWNSNVFKKLGQQIGKLHRISKNFESIEPVI---HINDWYENEEYNFLHYI-----------PIEETTIRKIASDVITSIQELSKSPSNYGLIHGDLWLENILVEND--LNLTMLDFQDCEKHFYIFDLAVPIYSAIEYSFVGNG--NIVDYENSIIKAIVEGYKE--EHDLPKEMLDQLPLFIKLKEIFEYSLMHMYWDKEELTEEQVRIMNLYRMKIENNHSFINI
4OCV Chain:A ((24-321))-----------TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEI---DGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRF-EDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTM---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1116 4322 3.87 16.13
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 3.87
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.350

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: