Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYA-GHDFFVKCDEREL-LPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDA----------------HSAFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLAS---HQPQPSLLHGDLWSGNCALGPD-GPYIFDP-ACYWGDRECDLAMLPLH--TEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
5UXD Chain:A ((8-253))--DALLDLAARHGLDLDGGTLRTEEIGLDFRVAFARAHDGGDWVLRLPRRPDVLERAAVEGRLLAMLAPHLDVAVPDWRIST----SELIAYPLLPGSPGLTVAADGEVSWHVDMASTVYARSLGSVVAQLHAVDAEA-AAATG---IEV-RSPAQVRGAWRQDLARVGAE----F----E-I---APALRERWEAWLADDGCWPGHSVLTHGELYPAHTLVEDERITAVLDWTTAAVGDPAKDLMFHQVSAPSAIFEVALQAYAEGGG------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 861 -14609 -16.97 -66.10
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -16.97
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.274

(partial model without unconserved sides chains):
PDB file : Tito_5UXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxd-query.scw
PDB file : Tito_Scwrl_5UXD.pdb: