Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIEINGKWIFRFPRNPISKENTKERLDFLISFSKVSSLKIPVPKYV---------ENNFIGYEKIQGSHPRPTNIKNLAELDKLKIAKQLGLFLKDLH--NFKSKKINFDTGYLIMRKGDYKTCPKEITKYLNADEIKNLETKLKAIANNPLNFKKPTSIIHGDFYFNNIIWNPDKKVITGVIDWANLGLGTPAMDFIMLADFNKNTNDKFLKDILKYYGAKGDDLFFQIKENAIIDAMNWFWSYYKEKNPKGVARMIKKLKKLLAE
4DFB Chain:A ((59-276))---EINRDFIFKFPKHSRGSTNLFNEVNILKRIH--NKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLME--EEYGMEFVSKILNHYKHK---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 795 44838 56.40 218.72
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 56.40
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_4DFB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dfb-query.scw
PDB file : Tito_Scwrl_4DFB.pdb: