Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRTTIDEAIARVDDWKGKEISYKPVSGGITNPNFKVDVEGEHFFLKIPGAGTDYINREVCHEANMIADESKAGPRVYYYFEDTGVEIFQWLDGYR-QVTFGDVY-DKDIFQSIFERIRDFHHLETKPLNLKQSIFEQAWDMNARAKKGGYISPFNDKMEYLLSAIE---KAL-AGSEELCPCHNDFWTNNLMYNEETNDLKIIDYEYASMNDPYVDLGLISAVNYFTEDMDVEMMKIYGGGKVDERAFARMKLNKIACDIKWAYWALYQAASSNVEFDYMNWYGQKMARLQHFWLDSRLDYWLDVAREKSTRIS
3DXQ Chain:B ((2-300))-MTDEARAKLAAIPMLAGY-TGPLERLGGLTNLVFRA----GDLCLRIP-------NRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAG-AQTMSPEKFKTRPGSPARAGEAFRKLHGSGA-VFPFRFELFAMIDDYLKVLSTKN--VTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTG--ERMWIVDWEYSGMNDPLWDLGDLSVEGKFNANQDEELMRAYFGGEARPAERGRVVIYKAMCDLLWTLWGLIQLANDNPVDDFRAYADGRFARCKALMETPEFSRHLAAVRMG-----


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1401 1948 1.39 6.83
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : 1.39
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: