Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELEPLLDSLAVLAGQEREVTLLPGGLTNANYRV----TTAT-----RDVVVRVASASSGLLSIDRDQEVHNSRAA----------AKAGVAPEVVEHRPGLLVVQFVP------DALTYGD--SDLAANLAGVADVVRRLHEGPAFA-GRFDMFDIQREYLAIMHTHRFRMPRGYLALAP----AAERMEAALRVHPEPRVPCHNDLLAANFL-------QDAQRLWIVDYEYSGMNEASFELGNIVQE------------------AHLTPEHLAELVTAYV-----------GHEDPVRTARAAL----WGIASAWAWTLWGTIQAGASDLDFDFWEWAMDKMDRAAQAFAEPGFDELLDTVGSPR
4CG8 Chain:A ((36-372))----------------EFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG-----------------EAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKY--LKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQARFD----------------------


General information:
TITO was launched using:
RESULT:

Template: 4CG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 804 -7195 -8.95 -29.98
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -8.95
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_4CG8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4cg8-query.scw
PDB file : Tito_Scwrl_4CG8.pdb: