Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDITLNYIKNNFANIINIVKPKNQGKLSCVYFADYNDTKIVIKIPMNAG---SLSKEIQFYELLKNIELPSPKILSYNYK-NIYRIPEYLIMTKLNGAPLHDNCCNDSTKFKIYADIGIYLKMIHSINYFSYSTTFTPYSCDGVINFNSWIEYLNSEIGVILNKVQLSGIFSVYHVEK-FRNHFKKLVNIDYNLVLLHGDLGPDHLYFRHDKFEGIIDPGLSFLGPKEYD-LAYMAIYTDPHYFHKIASTYGPYSQELVDSLMLLILSQKILRHFENEKVINIEKFINVISTYKLLD
3UZR Chain:A ((61-253))----------------------------------------VVKVPKRDSVRISQKRELELYRFLENCKL-SYQIPAVVYQSDRFNIMKYIKGERITYEQYHK--LSEKEKDALAYDEATFLKELHSIEIDCSVSLFS----DALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTD---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3UZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 636 -4125 -6.49 -22.06
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -6.49
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.190

(partial model without unconserved sides chains):
PDB file : Tito_3UZR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3uzr-query.scw
PDB file : Tito_Scwrl_3UZR.pdb: