Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKIYEKYRDLITNPFDIKYKNIEIKEIISYPPAGNDVVECLCKIGKDARNVFIKIERSKVC-DFATEIKNLNYLKNNSYYSKIPNIYESGIYNNKQYIVLSKIEGERLSDILIKNDNLRKELLYKYGQELAIIHRIPISNQKIAKQRAIN-SYPNKTMYTTLSKENNIKEYIKFLEDNDFKKEL---------TTFIHGDFHYANVLWLNNDINGVIDWEYSGIGLREQDIA--WACTLRPGQKFMDTMEDIQTFLKGYSEKEKFDIEKLRWCLINSYCHFYLMNENNEDYKNKLLILLRNCMEEKI
4FEV Chain:A ((48-236))----------------------------------------------PNAPELFLKHGKGSVANDVTDEMVRLNWL---TAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNC----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 601 3914 6.51 22.24
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 6.51
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.252

(partial model without unconserved sides chains):
PDB file : Tito_4FEV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4fev-query.scw
PDB file : Tito_Scwrl_4FEV.pdb: