Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRTTIDEAIARV-DDWKG---KEISYKPVSGGITNPNFKVDVEG----------EHFFLKIPGAGT-DYINREVCHEANMIADESKAGPRVYYYFEDTGVEIFQWLDGYRQVTFGDVYDKDIFQSIFERIRDFHHLETKPLNLK------QSIFEQAWDMNARAKKGGYI-------SPFNDKMEYLLSAIEKA--L-AGSEELCPCHNDFWTNNLMYNEETNDLKIIDYEYASMNDPYVDLGLISAVNYF------------------TEDMDVEMMKIYGGGKV-----D----ERAFARMKLNKIACDIKWAYWALYQAASSN--VEFDYMNWYGQKMARLQHFWLDSRLDYWLDVAREKSTRIS
3C5I Chain:D ((14-355))--PLYIKKICLEKVPEWNHFTEDNLRVKQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--NGGRIEEWLYG-DPLRIDDLKNPTILIGIANVLGKFHTLSR-KRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTN--KCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDFFLYAEQRLKMYDDQ---------------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1092 20189 18.49 72.62
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain D : 0.68

3D Compatibility (PKB) : 18.49
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: