Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHPAAQPTNQTSSHSPASPSNTEPCEQQSLKQQLLKQQPLKEQSLKQQSREQQLHTWLNEVFPNQSLQHEKIPGDASFRSYHRLTVDNQHYIVMDAPPAKESVKEFIAVGNLMAGYVHVPKMIATDEQQGFIVLEDLGNTDFADVIAKDLTDAGELAKTARYYQQAMQEILAIQKIDINDAKAVIPSYDDALLRREMGLFSDWFLPYIGVKMTPDLETLWQDLQSDIIQQVIAQ-PQVVVHRDFHSRNLMVLSHSDELGVIDFQDAVIGAYTYDLASLLRDAYINYDENWVNTHLAHYHQLAQLDKSLAEFTVDFNIMSMQRHLKVLGIFVRLFERDGKDRYLVNLPKVFNDLLTCLKAISQWDKRPTFDKFADWMTAAAAPAFQQKIQG
1ZYL Chain:A ((4-328))SAFTFQTLH------------------------------------------PDTIMDALFEHGIRVDSGLTPLNSYEN-RVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA--DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFE-DATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILW---RDGPMFVDLDDARNGPAVQDLWMLLNG-DKAEQRMQLETIIEAYEEFSEFDTAEIGL---IEPLRAMRLVYYLAWLMRRWADP-------AFPKNFPWLT------GEDYWLRQTATFIEQAKVLQEPPLQLTPMY


General information:
TITO was launched using:
RESULT:

Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1483 -100033 -67.45 -308.74
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -67.45
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.317

(partial model without unconserved sides chains):
PDB file : Tito_1ZYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1zyl-query.scw
PDB file : Tito_Scwrl_1ZYL.pdb: