Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAANPPRPSRSLQGKVAIVTGAGSRGETIGNGRAIALLLAEDGAKVVCVDREEALAQRTAELVLAENEGASALAVAADVSSAEECARVVDAALRLFGRVDVLVNGVGVLG--PPGTAVDVDAARWARGLEVNVTSMMLMAKYAVPAMRDNEPEAGVRGSIVNLGSVAGLRGGTPSLLYPTSKCAVVNMTRAMAAHHAKDGVRVNCVCPGMLYTPMV---YDAEGGMSAEVREARRRRSLLQTEGNAWDCAGPVRFLAGGEARWITGTVLTVDAGATCALAVSMPDGE
2CFC Chain:A ((3-248))---------------RVAIVTGASS-----GNGLAIATRFLARGDRVAALDLSAETLEETAR-THWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGA-----GVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD-----QPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYT-----------


General information:
TITO was launched using:
RESULT:

Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1347 -108490 -80.54 -450.16
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -80.54
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_2CFC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2cfc-query.scw
PDB file : Tito_Scwrl_2CFC.pdb: